sample of publications
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articles
- Reconstruction of multi-animal PET acquisitions with anisotropically variant PSF. Biomedical Physics and Engineering Express. 9. 2023
- Scintillator Geometrical Considerations for Detectors Based on Hexagonal SiPMs. IEEE Transactions on Radiation and Plasma Medical Sciences. 7. 2023
- Determination of the pharmacokinetics and pharmacodynamics of Isoniazid, Rifampicin, Pyrazinamide and Ethambutol in a cross-over cynomolgus macaque model of Mycobacterium tuberculosis infection. Pharmaceutics. 14:1-21. 2022
- Innovations in ex vivo Light Sheet Fluorescence Microscopy. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY. 168:37-51. 2022
- The contribution of microfluidics to the fight against tuberculosis. Nanotechnology Reviews. 11:40-54. 2022
- Molecular imaging of pulmonary Tuberculosis in an Ex-Vivo Mouse Model Using Spectral Photon-Counting Computed Tomography and Micro-CT. IEEE Access. 9:67201-67208. 2021
- Super-iterative Image Reconstruction in PET. IEEE Transactions on Computational Imaging. 7:248-257. 2021
- Development of an Inverted Epifluorescence Microscope for Long-Term Monitoring of Bacteria in Multiplexed Microfluidic Devices. SENSORS. 20:1-14. 2020
- Real-time 3D PET image with pseudoinverse reconstruction. Applied Sciences-Basel. 10. 2020
- A radiological score for the assessment of tuberculosis progression: Validation in mouse models. Tuberculosis. 121. 2020
- Simplified statistical image reconstruction for X-ray CT with beam-hardening artifact compensation. IEEE TRANSACTIONS ON MEDICAL IMAGING. 39:111-118. 2020
- X-ray-based virtual slicing of TB-infected lungs. Scientific Reports. 9:19404. 2019
- SiPM-based PET detector module for a 4pi span scanner. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT. 936:18-21. 2019
- Computed tomography-based biomarker for longitudinal assessment of disease Burden in pulmonary tuberculosis. MOLECULAR IMAGING AND BIOLOGY. 21:19-24. 2019
- Chemoenzymatic radiosynthesis of 2-deoxy-2-[18F]fluoro-D-trehalose ([18F]-2-FDTre): a PET radioprobe for in vivo tracing of trehalose metabolism. Carbohydrate Research. 472:16-22. 2019
- Applications of light-sheet microscopy in microdevices. Frontiers in Neuroanatomy. 13:1-15. 2019
- Surface scanning for 3D dose calculation in intraoperative electron radiation therapy. Radiation Oncology. 13:1-12. 2018
- Improving PET Quantification of Small Animal [Ga-68]DOTA-Labeled PET/CT Studies by Using a CT-Based Positron Range Correction. MOLECULAR IMAGING AND BIOLOGY. 20:584-593. 2018
- Unsupervised CT lung image segmentation of a mycobacterium tuberculosis infection model. Scientific Reports. 8 (9802):1-10. 2018
- Optimized CUBIC protocol for three-dimensional imaging of chicken embryos at single-cell resolution. DEVELOPMENT. 144:2092-2097. 2017
- 3D imaging in CUBIC-cleared mouse heart tissue: going deeper. Biomedical Optics Express. 7. 2016
- Experimental validation of gallium production and isotope-dependent positron range correction in PET. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT. 814:110-116. 2016
- Automatic Cardiac Self-Gating of Small-Animal PET Data. MOLECULAR IMAGING AND BIOLOGY. 18:109-116. 2016
- Functional segmentation of dynamic PET studies: Open source implementation and validation of a leader-follower-based algorithm. COMPUTERS IN BIOLOGY AND MEDICINE. 69:181-188. 2016
- Tissue-Dependent and Spatially-Variant Positron Range Correction in 3D PET. IEEE TRANSACTIONS ON MEDICAL IMAGING. 34:2394-2403. 2015
- Improved quantification for local regions of interest in preclinical PET imaging. PHYSICS IN MEDICINE AND BIOLOGY. 60:7127-7149. 2015
- Investigation of different sparsity transforms for the PICCS algorithm in small-animal respiratory gated CT. PLoS One. 10:1-18. 2015
- Development and validation of an open source quantification tool for DSC-MRI studies. COMPUTERS IN BIOLOGY AND MEDICINE. 58:56-62. 2015
- Recovery and normalization of triple coincidences in PET. MEDICAL PHYSICS. 42:1398-1410. 2015
- Positron Emission Tomography: Current Challenges and Opportunities for Technological Advances in Clinical and Preclinical Imaging Systems. Annual Review of Biomedical Engineering. 17:385-414. 2015
- Comparison of Methods to Reduce Myocardial 18F-FDG Uptake in Mice: Calcium Channel Blockers versus High-Fat Diets. PLoS One. 9:1-6. 2014
- Application of the compressed sensing technique to self-gated cardiac cine sequences in small animals. MAGNETIC RESONANCE IN MEDICINE. 72:369-380. 2014
- Avances tecnológicos en imagen molecular preclínica. Radioprotección : revista española de la Sociedad Española de Protección Radiológica. XXI:20-25. 2014
- Dual-exposure technique for extending the dynamic range of X-ray flat panel detectors. PHYSICS IN MEDICINE AND BIOLOGY. 59:421-439. 2014
- Modification of the TASMIP x-ray spectral model for the simulation of microfocus x-ray sources. MEDICAL PHYSICS. 41. 2014
- jClustering, an open framework for the development of 4D clustering algorithms. PLoS One. 8:1-7. 2013
- Positron range estimations with PeneloPET. PHYSICS IN MEDICINE AND BIOLOGY. 58:5127-5152. 2013
- Automatic TAC extraction from dynamic cardiac PET imaging using iterative correlation from a population template. Computer Methods and Programs in Biomedicine. 111:308-314. 2013
- Use of Split Bregman denoising for iterative reconstruction in fluorescence diffuse optical tomography. JOURNAL OF BIOMEDICAL OPTICS. 18. 2013
- Monte Carlo study of the effects of system geometry and antiscatter grids on cone-beam CT scatter distributions. MEDICAL PHYSICS. 40. 2013
- Improved dead-time correction for PET scanners: application to small-animal PET. PHYSICS IN MEDICINE AND BIOLOGY. 58:2059-2072. 2013
- MRI compatibility of position-sensitive photomultiplier depth-of-interaction PET detectors modules for in-line multimodality preclinical studies. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT. 702:83-87. 2013
- Massively parallelizable list-mode reconstruction using a Monte Carlo-based elliptical Gaussian model. MEDICAL PHYSICS. 40:1-11. 2013
- Misalignments calibration in small-animal PET scanners based on rotating planar detectors and parallel-beam geometry. PHYSICS IN MEDICINE AND BIOLOGY. 57:7493-7518. 2012
- Approach to assessing myocardial perfusion in rats using static [13N]-ammonia images and a small-animal PET. MOLECULAR IMAGING AND BIOLOGY. 14:541-545. 2012
- NEMA NU 4-2008 comparison of preclinical PET imaging systems. JOURNAL OF NUCLEAR MEDICINE. 53:1300-1309. 2012
- Software architecture for multi-bed FDK-based reconstruction in X-ray CT scanners. Computer Methods and Programs in Biomedicine. 107:218-232. 2012
- A method for small-animal PET/CT alignment calibration. PHYSICS IN MEDICINE AND BIOLOGY. 57:199-207. 2012
- Waking-like brain function in embryos. CURRENT BIOLOGY. 22:852-861. 2012
- Accuracy of CT-based attenuation correction in PET/CT bone imaging. PHYSICS IN MEDICINE AND BIOLOGY. 57:2477-2490. 2012
- Influence of absorption and scattering on the quantification of fluorescence diffuse optical tomography using normalized data. JOURNAL OF BIOMEDICAL OPTICS. 17:1-9. 2012
- Fluorescence diffuse optical tomography using the split Bregman method. MEDICAL PHYSICS. 38:6275-6284. 2011
- GPU-based fast iterative reconstruction of fully 3-D PET sinograms. IEEE TRANSACTIONS ON NUCLEAR SCIENCE. 58:2257-2263. 2011
- Split operator method for fluorescence diffuse optical tomography using anisotropic diffusion regularisation with prior anatomical information. Biomedical Optics Express. 2:2632-2648. 2011
- Fully 3D GPU PET reconstruction. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT. 648:169-171. 2011
- Study of CT-based positron range correction in high resolution 3D PET imaging. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT. 648:172-175. 2011
- Feasibility of U-curve method to select the regularization parameter for fluorescence diffuse optical tomography in phantom and small animal studies. OPTICS EXPRESS. 19:11490-11506. 2011
- Chronic cannabinoid administration to periadolescent rats modulates the metabolic response to acute cocaine in the adult brain. MOLECULAR IMAGING AND BIOLOGY. 13:411-415. 2011
- NEMA NU 4-2008 performance measurements of two commercial small-animal PET scanners: ClearPET and rPET-1. IEEE TRANSACTIONS ON NUCLEAR SCIENCE. 58:58-65. 2011
- A SPECT scanner for rodent imaging based on small-area gamma cameras. IEEE TRANSACTIONS ON NUCLEAR SCIENCE. 57:2524-2531. 2010
- Effects of the super Bialkali photocathode on the performance characteristics of a position-sensitive depth-of-interaction PET detector module. IEEE TRANSACTIONS ON NUCLEAR SCIENCE. 57:2437-2441. 2010
- Data acquisition electronics for gamma ray emission tomography using width-modulated leading-edge discriminators. PHYSICS IN MEDICINE AND BIOLOGY. 55:4291-4308. 2010
- Performance evaluation of SiPM photodetectors for PET imaging in the presence of magnetic fields. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT. 613:308-316. 2010
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book chapters
- Optical Properties of Tissues in the Near Infrared: Their Relevance for Optical Bioimaging. In: Near Infrared-Emitting Nanoparticles for Biomedical Applications. SPRINGER. 1-20. 2020
- Positron Emission Tomography. In: Cardiac CT, PET & MR. Ed. John Wiley & Sons, Inc. 1-37. 2019
- Positron Emission Tomography. In: Cardiac CT, PET & MR. John Wiley & Sons, Inc, New York. 1-37. 2019
- Design and Assessment Principles of Semiconductor Flat-Panel Detector-Based X-Ray Micro-CT Systems for Small-Animal Imaging. In: Integrated Microsystems: Electronics, Photonics, and Biotechnology. CRC Press & IEEE. 309-335. 2012
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conference contributions
- Awake preclinical brain PET imaging based on point sources 2019
- Tuberculosis Lesions in CT Images Inferred using 3D-CNN and Multi-Task Learning. 294-297. 2019
- A noise correction double time-over-threshold technique for multiplexed read-outs 2018
- Design and performance study of a quasi-spherical PET Scanner 2018
- Design and performance study of a quasi-spherical PET scanner. 12-13. 2018
- Design and performance study of a quasi-spherical PET scanner and hexagonal SiPM 2018
- Diseño y estudio de un escáner PET con cobertura 4pi. 261-264. 2018
- PDMS Microfluidic Chip for Multiplexed Testing of Antibiotics against Tuberculosis. 279-282. 2018
- Performance evaluation of the PET subsystem of the extended FOV SuperArgus 6R preclinical scanner 2018
- Radiomics for the Discrimination of Tuberculosis Lesions 2018
- SiPM-based PET detector module for a 4pi span scanner 2018
- Spectral photon-counting CT of lungs of mice infected with Mycobacterium Tuberculosis: potential for locating Tuberculosis involvement 2018
- TOWARDS AN INFORMATIONAL MODEL FOR TUBERCULOSIS LESIONDISCRIMINATION ON X-RAY CT IMAGES. 265-268. 2018
- Tuberculosis Histopathology on X Ray CT. 169-179. 2018
- Accurate Lung Segmentation of Thorax CT Images on a Tuberculosis Infection Model. 251-254. 2017
- Proposal for a PET Scanner with 4 pi Steradian Coverage. 667-670. 2017
- 3D imaging of the cleared intact murine colon with light sheet microscopy 2016
- Design and development of a wireless infrared EEG recorder for chicken embry. 1-6. 2016
- Design and development of a wireless infrared EEG recorder for chicken embryos 2016
- Design and development of a wireless infrared EEG recorder for chicken embryos 2016
- Desktop 3D printing in medicine to improve surgical navigation in acral tumors 2016
- Geometric Calibration Workflow for High Resolution Cone Beam Micro-Computed Tomography. 1-3. 2016
- Improving the Image Quality of High Energy Positron Based Tracers Using a Novel Tissue-Dependent, Spatially-Variant Positron Range Correction. 475-475. 2016
- Development of a mouse lung phantom of infectious diseases for Micro-CT. 1-3. 2015
- Evaluation of attenuation correction in a small animal PET-CT scanner. 394-397. 2015
- Fluorescence multi-scale endoscopy and its applications in the study and diagnosis of gastro-intestinal diseases: set-up design and software implementation 2015
- High resolution 3D microscopy of development neurogenesis in chick embryo models. 495-498. 2015
- Highly Multiplexed DOI PET Detector Based on SiPM Sensors 2015
- Image Quality Assessment of Multiplexed PET. 1-3. 2015
- Simulation, Development and Testing of a PET Detector Prototype Using Monolithic Scintillator Crystals Treated with the Sub-Surface Engraving Technique. 1-3. 2015
- A Prior-Based Image Variation (PRIVA) approach applied to motion-based compressed sensing cardiac cine MRI.. 233-236. 2014
- Dispositivo de monitorización de la señal ECG de animal de laboratorio para la adquisición de imágenes médicas con sincronismo cardio-respiratorio 2014
- Herramienta de segmentación de pulmón y de granulomas tuberculosos en imágenes de TAC 2014
- Implementación y validación de una herramienta de código abierto para cuantificación de estudios DSC-MRI 2014
- In-line high resolution PET and 3T MRI hybrid device for preclinical multimodal imaging 2014
- Iterative dual-energy material decomposition for slow kVp switching: a compressed sensing approach. 491-494. 2014
- Novel 4D image reconstruction for dynamic X-Ray computed tomography in slow rotating scanners 2014
- Simulations, Testing and Results for the Pixelation of LYSO Crystals for Gamma Detectors Using SSLE Techniques 2014
- Spatially-variant positron range correction in 3D PET imaging 2014
- Spatiotemporal total variation reconstruction for dynamic PET 2014
- Split Bregman-singular value analysis approach to solve the compressed sensing problem of fluorescence diffuse optical tomography. 415-418. 2014
- Tracer kinetic modeling with R for batch processing of dynamic PET studies. 301-304. 2014
- Advanced Networked Modular Personal Dosimetry System. 1398-1401. 2013
- Compressed sensing for cardiac MRI cine sequences: a real implementation on a small-animal scanner. 214-217. 2013
- Evaluating the best treatment, calcium channel blocker or ketogenic diet, to reduce myocardial 18FDG uptake 2013
- La electricidad del cuerpo humano 2013
- Are exhausted 68Ge/68Ga generators useful in the preparation of radiopharmaceuticals for preclinical PET imaging? 2012
- Avances tecnológicos en imagen molecular preclínica 2012
- Brain glucose metabolism in adult rats exposed to the cannabinoid receptor agonist CP-55,940 during their adolescence 2012
- Complete Scheme for Beam Hardening Correction in Small Animal Computed Tomography. 3835-3838. 2012
- Diseño y caracterización de gammacámara con cristales de centelleo CsI(Na) para tomógrafo SPECT 2012
- Dose and Scatter characteristics of a Novel Cone Beam CT System for Musculoskeletal Extremities 2012
- Effects of morphine self-administration on glucose brain metabolism of adults rats that were exposed during their adolescence to the cannabinoid receptor agonist CP-55,940 2012
- Generadores de 68GE/68GA"agotados": utilidad en la preparación automática de 68GA DOTATOC para investigación en pequeño animal 2012
- Herramienta automática para calibrado geométrico de un tomógrafo SPECT de animales de laboratorio 2012
- Investigation of Different Compressed Sensing Approaches for Respiratory Gating in Small Animal CT. 3344-3346. 2012
- Iterative Dual-Energy Raw Data Decomposition for Slow kVp Switching: a Feasibility Study. 473. 2012
- MRI compatibility of PS-PMT DOI PET detectors modules for in-line multimodality preclinical studies 2012
- Un nuevo algoritmo para la reducción del artefacto de anillo en tomografía computarizada de pequeño animal 2012
- jClustering, un entorno de código libre para ImageJ para el desarrollo de algoritmos de clustering aplicados a segmentación de imágenes médicas dinámicas 2012
- ART with Split Bregman Denoising: A Reconstruction Method for Fluorescence Diffuse Optical Tomography 2011
- Assessment of New Photosensors for Fast Timing Applications with Large Scintillator Detectors. 72-74. 2011
- Automatic Cardiac Gating of Small-animal PET from List-mode Data. 206-209. 2011
- Automatic Monte-Carlo Based Scatter correction for X-ray Cone Beam CT using General Purpose Graphic Processing Units (GP-GPU): a Feasibility study. 3705-3709. 2011
- Automatic Self Gating of Small-Animal PET from List-Mode Data 2011
- Clustering leader-follower para la segmentación automática de estudios PET cardiacos 2011
- Corrección empírica de primer y segundo orden del artefacto de endurecimiento de haz en imágenes de micro-TAC. 433-436. 2011
- Deadtime and pile-up correction method based on the singles to coincidences ratio for PET. 2933-2935. 2011
- Design of DOI PET detector Modules using phoswich and SIPMs: First Results. 3311-3313. 2011
- Equipos para experimentación animal 2011
- FBP Reconstruction of Sinograms with Gaps Based on the Inversion of a Perturbed Matrix 2011
- Fully-3D GPU PET Reconstruction. 169-171. 2011
- Herramienta para la segmentación de estructuras óseas de embriones de ave in ovo en imágenes de CT. 721-724. 2011
- High-Resolution Dynamic Cardiac MRI on Small Animals Using Reconstruction Based on Split Bregman Methodology. 3462-3464. 2011
- Interfaz de usuario para la adquisición de datos, calibración y reconstrucción de imagen para tomógrafo SPECT de animales de laboratorio. 515-518. 2011
- Kinetic Modeling 2011
- Leader-follower clustering algorithm for automatic segmentation of cardiac PET studies. 3133-3136. 2011
- Measurement of activity Produced by Low energy Pronton Beam in metals using off-Line PET Imaging. 3514-3517. 2011
- Molecular imaging of pheochromocytoma with 68Ga-DOTATOC-PET: Comparative pilot study with neuropancreatic tumor 2011
- Monte Carlo Simulation of a TOF-PET Scanner. 4420-4428. 2011
- PET and SPECT imaging 2011
- PeneloPET simulations of the Biograph ToF clinical PET scanner. 4420-4428. 2011
- Quantification Limits of Iterative PET Reconstruction Algorithms and Improved Estimation of Kinetic Constants. 2968-2972. 2011
- Quantification limits of iterative PET reconstruction algorithms and improved estimation of kinetic constants. 1766-1770. 2011
- Reconstrucción de Tomografía Óptica Difusiva por Fluorescencia usando Compressed Sensing Split Bregman. 599-602. 2011
- Skull deformation patterns in two mouse genetic syndromes, Costello and CFC, using computed tomography 2011
- Uso del método de Split Bregman para la resolución del problema de compressed sensing en imagen de resonancia magnética dinámica cardiaca para pequeño animal. 453-456. 2011
- A Statistical Image Reconstruction Algorithm for Polyenergetic X-Ray CT: Preliminary Results on a Small Animal Scanner 2010
- Aceleración de un Programa de Reconstrucción Iterativa para PET mediante el uso de GPUs 2010
- Corrección de atenuación de imágenes PET usando datos de TAC en el escáner para animales pequeños Argus PET/CT 2010
- Cuantificación del infarto de miocardio en imágenes PET mediante mapas polares. 1-4. 2010
- Iterative Automatic Segmentation in Cardiac PET Based on TAC Correlation: Preliminary Results 2010
- Performance Evaluation of SiPM Photodetectors for PET Imaging in the Presence of Magnetic Fields 2010
- Segmentación automática de estudios PET cardíacos con 13NH3 basada en correlación iterativa 2010
- Validation of peneloPET simulations of the Biograph PET/CT scanner with TOF capabilities 2010
- Viabilidad del uso de fotodetectores SiPM en sistemas PET/IRM 2010
- Evaluación multimodal del infarto de miocardio crónico en ratas: comparación entre RM y PET 2009
- Performance Evaluation of SiPM Photosensors in the Presence of Magnetic Fields. 171-172. 2009
- Performance evaluation of SIPM photosensors for PET imaging in the presence of magnetic fields. 163. 2009
- Performance Evaluation of SiPM Detectors for PET Imaging in the Presence of Magnetic Fields. 3591-3595. 2008