sample of publications
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articles
- Fine-tuning and evaluation of DialoGPT on several datasets of English movies and TV series subtitles. Procesamiento del Lenguaje Natural. 2023
- Exploring deep learning methods for recognizing rare diseases and their clinical manifestations from texts. BMC BIOINFORMATICS. 23:1-23. 2022
- Multimodal Fake News Detection. Information (Switzerland). 13:1-16. 2022
- The RareDis corpus: A corpus annotated with rare diseases, their signs and symptoms. JOURNAL OF BIOMEDICAL INFORMATICS. 125:1-12. 2022
- Exploring the impact of covid-19 on social life by deep learning. Information (Switzerland). 12:1-16. 2021
- Sarcasm detection with BERT. Procesamiento del Lenguaje Natural. 13-25. 2021
- Evaluación de un modelo transformador aplicado a la tarea de generación de resúmenes en distintos dominios = Evaluation of a transformer model applied to the task of text summarization in different domains. Procesamiento del Lenguaje Natural. 66:27-39. 2021
- Comparing deep learning architectures for sentiment analysis on drug reviews. JOURNAL OF BIOMEDICAL INFORMATICS. 110:1-11. 2020
- One stage versus two stages deep learning approaches for the extraction of drug-drug interactions from texts = Comparando enfoques deep learning en una fase y en dos fases para extraer interacciones farmacológicas de texto. Procesamiento del Lenguaje Natural. 69-76. 2020
- A two-stage deep learning approach for extracting entities and relationships from medical texts. JOURNAL OF BIOMEDICAL INFORMATICS. 99:103285-1-103285-12. 2019
- Cohort selection for clinical trials using deep learning models. JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION. 26:1181-1188. 2019
- Predicting of anaphylaxis in big data EMR by exploring machine learning approaches. JOURNAL OF BIOMEDICAL INFORMATICS. 87:50-59. 2018
- Evaluation of pooling operations in convolutional architectures for drug-drug interaction extraction. BMC BIOINFORMATICS. 19. 2018
- Simplifying drug package leaflets written in Spanish by using word embedding. Journal of Biomedical Semantics. 8. 2017
- Exploring convolutional neural networks for drug-drug interaction extraction. Database-The Journal of Biological Databases and Curation. 2017
- Conceptual models of drug-drug interactions: A summary of recent efforts. KNOWLEDGE-BASED SYSTEMS. 114:99-107. 2016
- EasyLecto: Un sistema de simplificación léxica de efectos adversos presentes en prospectos de fármacos en español. Procesamiento del Lenguaje Natural. 177-180. 2016
- Turning user generated health-related content into actionable knowledge through text analytics services. COMPUTERS IN INDUSTRY. 78:43-56. 2016
- Pharmacovigilance through the Development of Text Mining and Natural Language Processing Techniques. JOURNAL OF BIOMEDICAL INFORMATICS. 58:288-291. 2015
- DINTO: Using OWL ontologies and SWRL rules to infer drug-drug interactions and their mechanisms. Journal of Chemical Information and Modeling. 55:1698-1707. 2015
- Application of Domain Ontologies to Natural Language Processing: A Case Study for Drug-Drug Interactions. International Journal of Information Retrieval Research. 5:19-38. 2015
- Exploring Spanish Health Social Media for detecting drug effects. BMC Medical Informatics and Decision Making. 15. 2015
- Lessons learnt from the DDIExtraction-2013 Shared Task. JOURNAL OF BIOMEDICAL INFORMATICS. 51:152-164. 2014
- TrendMiner: Large-scale cross-lingual trend mining summarization of real-time media streams. Procesamiento del Lenguaje Natural. 53:163-166. 2014
- Special Issue on Mining the Pharmacovigilance Literature. JOURNAL OF BIOMEDICAL INFORMATICS. 49:1-2. 2014
- The DDI corpus: An annotated corpus with pharmacological substances and drug-drug interactions. JOURNAL OF BIOMEDICAL INFORMATICS. 46:914-920. 2013
- Lightly supervised acquisition of named entities and linguistic patterns for multilingual text mining. KNOWLEDGE AND INFORMATION SYSTEMS. 35:87-109. 2013
- Prototipo buscador de información médica en corpus multilingües y extractor de información sobre fármacos = Medical information search and information extraction about drugs prototype on a multilingual corpus. Procesamiento del Lenguaje Natural. 49:209-212. 2012
- Using a shallow linguistic kernel for drug-drug interaction extraction. JOURNAL OF BIOMEDICAL INFORMATICS. 44:789-804. 2011
- A comparison of machine learning techniques for detection of drug target articles. JOURNAL OF BIOMEDICAL INFORMATICS. 43:902-913. 2010
- Extracting Drug-Drug Interactions from Biomedical Texts. BMC BIOINFORMATICS. 11. 2010
- Resolving Anaphoras for the Extraction of Drug-Drug Interactions in Pharmacological Documents. BMC BIOINFORMATICS. 11. 2010
- Drug Name Recognition and Classification in Biomedical Texts: A Case Study Outlining Approaches Underpinning Automated Systems. DRUG DISCOVERY TODAY. 13:816-823. 2008
- Detección de fármacos genéricos en textos biomédicos = Detecting Generic Drugs in Biomedical Texts. Procesamiento del Lenguaje Natural. 27-34. 2008
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books
- Desarrollo de Bases de Datos: Casos Prácticos Desde el Análisis a la Implementación. MADRID: RA-MA, S.A. EDITORIAL Y PUBLICACIONES. 2013
- Proceedings of the 1st Challenge Task on Drug-Drug Interaction Extraction 2011. Huelva, Spain, September 7, 2011.. Ed. 761. 2011
- A friendly notebook on Data Structures and Algorithms. COPY RED, S.A.. 2011
- Manual de ejercicios. Estructura de datos y algoritmos. COPY RED, S.A.. 2011
- Application of information extraction techniques to pharmalogical domain: extracting drug-drug interaction. Ed. 10. Sociedad Española para el Procesamiento del Lenguaje Natural. 2011
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conference contributions
- Development of an annotated corpus of rare diseases to promote an accurate diagnosis. 70-70. 2021
- Extracting information from radiology reports by Natural Language Processing and Deep Learning. 804-817. 2021
- Early Risk Prediction by means of DeepLearning. 1-13. 2019
- Hulat-TaskAB at eHealth-KD Challenge 2019, Knowledge Recognition from Health Documents by BiLSTM-CRF. 35-42. 2019
- Lexical simplification approach to support the accessibility guidelines. 1-4. 2019
- Protected Health Information Recognition by BiLSTM-CRF. 679-686. 2019
- A Hybrid Bi-LSTM-CRF Model to Recognition of Disabilities from Biomedical Texts.. 44-52. 2018
- A Hybrid Bi-LSTM-CRF model for Knowledge Recognition from eHealth documents. 65-70. 2018
- LABDA at TASS-2018 Task 3: Convolutional Neural Networks for Relation Classification in Spanish eHealth documents. 71-76. 2018
- LABDA's Early Steps Toward Multimodal Stance Detection. 180-186. 2018
- UC3M-NII Team at SemEval-2018 Task 7: Semantic Relation Classification in Scientific Papers via Convolutional Neural Network. 793-793. 2018
- Exploring convolutional neural networks for sentiment analysis of spanish tweets. 1014-1022. 2017
- LABDA at SemEval-2017 Task 10: Extracting keyphrases from scientific publications by combining the BANNER tool and the UMLS Semantic Network. 947-950. 2017
- LABDA at SemEval-2017 Task 10: relation classification between keyphrases via convolutional neural network. 969-972. 2017
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MC-UC3M Participation at TAC 2017 Adverse Drug
Reaction Extraction from Drug Labels 2017 - Extraction of Drug-Drug Interactions by Recursive Matrix-Vector Spaces. 65-72. 2016
- LABDA at the 2016 BioASQ challenge task 4a: Semantic Indexing by using ElasticSearch. 16-22. 2016
- LABDA at the 2016 TASS challenge task: using word embeddings for the sentiment analysis task. 29-33. 2016
- Simplifying Drug Package Leaflets. 20-28. 2016
- Using Recursive Neural Networks to Detect and Classify Drug-Drug Interactions from Biomedical Texts. 1666-1667. 2016
- Combining Conditional Random Fields and Word Embeddings for the CHEMDNER-patents task. 90-93. 2015
- Exploring Word Embedding for Drug Name Recognition. 64-72. 2015
- Exploring language technologies to provide support to WCAG 2.0 and E2R guidelines 2015
- Word Embedding clustering for Disease Named Entity Recognition. 299-304. 2015
- ADRSpanishTool: Una herramienta para la detección de efectos adversos e indicaciones = ADRSpanishTool: A tool for extracting adverse drug reactions and indications. 177-180. 2014
- Detecting drugs and adverse events from Spanish social media streams. 106-115. 2014
- Extracting drug indications and adverse drug reactions from Spanish health social media. 98-106. 2014
- Women in computer science: Survey on the perception of the women's participation in STEM studies. 1-2. 2014
- A web prototype for detecting chemical compounds and drugs 2013
- An Ontology for formal representation of Drug Drug Interaction Knowledge 2013
- An ontology for drug-drug interactions 2013
- Annotation Issues in Pharmacological Texts. 211-219. 2013
- Combining Dictionaries and Ontologies for Drug Name Recognition in Biomedical Texts. 27-30. 2013
- Corpus DDI: Un corpus anotado con fármacos e interacciones farmacológicas 2013
- Extraction of Drug-Drug Interactions from Biomedical Texts. 341-350. 2013
- Recognizing Chemical Compounds and Drugs: a Rule-Based Approach Using Semantic Information. 121-128. 2013
- A linguistic rule-based approach to extract drug-drug interactions from pharmacological documents. 1471-2105. 2011
- DDIExtractor: A Web-based Java Tool for Extracting Drug-Drug Interactions from Biomedical Texts. 274-277. 2011
- The 1st DDIExtraction-2011 Challenge Task: Extraction of Drug-Drug Interactions from Biomedical Texts. 1-9. 2011
- Combining Syntactic Information and Domain-Specific Lexical Patterns to Extract Drug-Drug Interactions from Biomedical Texts 2010
- A Preliminary Approach to Rcognize Generic Drug Names by Combining UMLS Resources and USAN Naming Conventions. 100-101. 2008
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theses